cellrank-mcp

v1.0.0APIsstable

Enables natural language interaction for scRNA-Seq analysis including preprocessing, clustering, and visualization using the CellRank library. It allows users and agents to perform complex genomic data tasks through standard MCP clients and framework

cellrankmcpai-integration
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About

Enables natural language interaction for scRNA-Seq analysis including preprocessing, clustering, and visualization using the CellRank library. It allows users and agents to perform complex genomic data tasks through standard MCP clients and framework

Features

  • Enables natural language interaction for scRNA-Seq analysis

Use Cases

Enables natural language interaction for scRNA-Seq analysis including preprocess
scmcphub

Maintainer

LicenseMIT
Languagetypescript
Versionv1.0.0
UpdatedN/A
Statushealthy
Maintenanceactive

Works with

ClaudeOpenAIwindowsmacoslinux

Installation

Manual Installation

npx cellrank

Examples

No examples available for this server.

Configuration

Configuration Details

Config File

claude_desktop_config.json

Web UI

Not available

Security

Authentication

RequiredNo

Features

Data Encryption
Audit Logging
RBAC Support

Performance

Response Metrics

Response Time< 200ms
ThroughputMedium

Resource Usage

Memory UsageLow
CPU UsageLow

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Quick Config Preview

{ "mcpServers": { "cellrank": { "command": "npx", "args": ["-y", "cellrank"] } } }

Add this to your claude_desktop_config.json or .cursor/mcp.json

Read the full setup guide →

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